Sequence Similarity Clusters for the Entities in PDB 1KDM

Entity #1 | Chains: A
sex hormone-binding globulin protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 8671
95 % 9 9 7865 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 9 9 7797
70 % 9 9 7552
50 % 9 9 6951
40 % 9 9 6427
30 % 9 9 5616

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures