Sequence Similarity Clusters for the Entities in PDB 1KDK

Entity #1 | Chains: A
Sex Hormone-Binding Globulin protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 8809
95 % 2 9 7976 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 2 9 7911
70 % 2 9 7666
50 % 2 9 7042
40 % 2 9 6517
30 % 2 9 5689

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures