Sequence Similarity Clusters for the Entities in PDB 1KDJ

Entity #1 | Chains: A
PLASTOCYANIN protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 21599
95 % 3 4 19428 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 4 18895
70 % 3 4 17391
50 % 3 4 15152
40 % 39 65 710
30 % 39 65 703

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures