Sequence Similarity Clusters for the Entities in PDB 1KDJ

Entity #1 | Chains: A
PLASTOCYANIN protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47617
95 % 3 4 20723 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 3 4 20139
70 % 3 4 18500
50 % 3 4 16057
40 % 39 65 678
30 % 39 65 671

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures