Sequence Similarity Clusters for the Entities in PDB 1KDI

Entity #1 | Chains: A
PLASTOCYANIN protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 46931
95 % 4 4 20416 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 4 4 19852
70 % 4 4 18216
50 % 4 4 15825
40 % 40 65 669
30 % 40 65 666

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.