Sequence Similarity Clusters for the Entities in PDB 1KDI

Entity #1 | Chains: A
PLASTOCYANIN protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 21552
95 % 4 4 19398 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 4 18868
70 % 4 4 17366
50 % 4 4 15125
40 % 40 65 708
30 % 40 65 700

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures