Sequence Similarity Clusters for the Entities in PDB 1KDG

Entity #1 | Chains: A,B
cellobiose dehydrogenase protein, length: 546 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17260
95 % 1 2 15900 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 15605
70 % 1 2 14634
50 % 1 2 12965
40 % 1 2 11730
30 % 1 4 7724

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures