Sequence Similarity Clusters for the Entities in PDB 1KDG

Entity #1 | Chains: A,B
cellobiose dehydrogenase protein, length: 546 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16449
95 % 1 2 15208 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 14919
70 % 1 2 13986
50 % 1 2 12418
40 % 1 2 11245
30 % 1 4 7401

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.