Sequence Similarity Clusters for the Entities in PDB 1KDG

Entity #1 | Chains: A,B
cellobiose dehydrogenase protein, length: 546 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17550
95 % 1 2 16141 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 15838
70 % 1 2 14846
50 % 1 2 13144
40 % 1 2 11886
30 % 1 4 7833

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures