Sequence Similarity Clusters for the Entities in PDB 1KDC

Entity #1 | Chains: A
STAPHYLOCOCCAL NUCLEASE protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65226
95 % 83 129 286 Flexibility: Low
Max RMSD: 10.4, Avg RMSD: 0.8
PDBFlex
90 % 230 292 90
70 % 230 292 108
50 % 230 292 145
40 % 230 292 160
30 % 230 292 172

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures