Sequence Similarity Clusters for the Entities in PDB 1KDA

Entity #1 | Chains: A
STAPHYLOCOCCAL NUCLEASE protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 38 69 562
95 % 202 292 109 Flexibility: Low
Max RMSD: 10.4, Avg RMSD: 0.8
PDBFlex
90 % 202 292 114
70 % 202 292 128
50 % 202 292 157
40 % 202 292 171
30 % 202 292 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures