Sequence Similarity Clusters for the Entities in PDB 1KD7

Entity #1 | Chains: A,B,C,K,L,M
TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 13B protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 261
95 % 4 6 364 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 4 6 387
70 % 4 6 424
50 % 4 6 503
40 % 4 6 546
30 % 4 6 546

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.