Sequence Similarity Clusters for the Entities in PDB 1KD0

Entity #1 | Chains: A,B
beta-methylaspartase protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 17857
95 % 3 5 8434 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 5 8374
70 % 3 5 8050
50 % 4 7 5096
40 % 4 7 4814
30 % 4 7 4389

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.