Sequence Similarity Clusters for the Entities in PDB 1KD0

Entity #1 | Chains: A,B
beta-methylaspartase protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21952
95 % 3 5 10023 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 5 10408
70 % 3 5 9906
50 % 4 7 5529
40 % 4 7 5167
30 % 4 7 4606

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures