Sequence Similarity Clusters for the Entities in PDB 1KCV

Entity #1 | Chains: L
PC282 IMMUNOGLOBULIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40559
95 % 1 2 30946 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 29681
70 % 269 2287 1
50 % 554 4633 1
40 % 554 4633 1
30 % 602 5461 1
Entity #2 | Chains: H
PC282 IMMUNOGLOBULIN protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40275
95 % 1 2 30783 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 29560
70 % 270 2244 2
50 % 555 4633 1
40 % 555 4633 1
30 % 603 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.