Sequence Similarity Clusters for the Entities in PDB 1KCV

Entity #1 | Chains: L
PC282 IMMUNOGLOBULIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 37981
95 % 1 2 32206 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 30852
70 % 311 2519 1
50 % 639 5107 1
40 % 793 5756 1
30 % 981 7175 1
Entity #2 | Chains: H
PC282 IMMUNOGLOBULIN protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 37982
95 % 1 2 32207 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 30853
70 % 312 2478 2
50 % 640 5107 1
40 % 794 5756 1
30 % 982 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures