Sequence Similarity Clusters for the Entities in PDB 1KCS

Entity #1 | Chains: L
PC282 IMMUNOGLOBULIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39645
95 % 2 2 30245 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 29027
70 % 946 1841 2
50 % 2343 4537 1
40 % 2343 4537 1
30 % 2679 5342 1
Entity #2 | Chains: H
PC282 IMMUNOGLOBULIN protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 39364
95 % 2 2 30086
90 % 2 2 28906
70 % 1139 2197 1
50 % 2344 4537 1
40 % 2344 4537 1
30 % 2680 5342 1
Entity #3 | Chains: P
PS1 peptide protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.