Sequence Similarity Clusters for the Entities in PDB 1KCR

Entity #1 | Chains: L
PC283 IMMUNOGLOBULIN protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48249
95 % 6 10 3791 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 8 12 3377
70 % 1560 2519 1
50 % 3172 5107 1
40 % 3606 5756 1
30 % 4458 7175 1
Entity #2 | Chains: H
PC283 IMMUNOGLOBULIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48250
95 % 1 1 40009
90 % 12 19 2531
70 % 1534 2478 2
50 % 3173 5107 1
40 % 3607 5756 1
30 % 4459 7175 1
Entity #3 | Chains: P
PS1 peptide protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures