Sequence Similarity Clusters for the Entities in PDB 1KCR

Entity #1 | Chains: L
PC283 IMMUNOGLOBULIN protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62103
95 % 6 10 3632 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 45 76 399
70 % 1508 2426 1
50 % 3063 4913 1
40 % 3063 4913 1
30 % 3546 5780 1
Entity #2 | Chains: H
PC283 IMMUNOGLOBULIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61447
95 % 1 1 43112
90 % 12 18 2644
70 % 1479 2376 2
50 % 3064 4913 1
40 % 3064 4913 1
30 % 3547 5780 1
Entity #3 | Chains: P
PS1 peptide protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures