Sequence Similarity Clusters for the Entities in PDB 1KCR

Entity #1 | Chains: L
PC283 IMMUNOGLOBULIN protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60882
95 % 5 8 4448 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 44 73 395
70 % 1438 2329 1
50 % 2922 4717 1
40 % 2922 4717 1
30 % 3395 5571 1
Entity #2 | Chains: H
PC283 IMMUNOGLOBULIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60244
95 % 1 1 42310
90 % 12 17 2867
70 % 1412 2282 2
50 % 2923 4717 1
40 % 2923 4717 1
30 % 3396 5571 1
Entity #3 | Chains: P
PS1 peptide protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.