Sequence Similarity Clusters for the Entities in PDB 1KCG

Entity #1 | Chains: A,B
NKG2-D type II integral membrane protein protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 5744
95 % 3 5 6407 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 3 5 6390
70 % 5 7 4740
50 % 5 7 4552
40 % 5 7 4326
30 % 160 220 99
Entity #2 | Chains: C
ULBP3 protein protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62220
95 % 1 1 43361
90 % 1 1 41191
70 % 1 1 36257
50 % 2 2 23408
40 % 2 2 20593
30 % 2 2 17445

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.