Sequence Similarity Clusters for the Entities in PDB 1KCG

Entity #1 | Chains: A,B
NKG2-D type II integral membrane protein protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 5834
95 % 3 5 6493 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 3 5 6476
70 % 5 7 4805
50 % 5 7 4610
40 % 5 7 4383
30 % 160 220 100
Entity #2 | Chains: C
ULBP3 protein protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62939
95 % 1 1 43858
90 % 1 1 41637
70 % 1 1 36616
50 % 2 2 23625
40 % 2 2 20781
30 % 2 2 17601

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.