Sequence Similarity Clusters for the Entities in PDB 1KCD

Entity #1 | Chains: A
ENDOPOLYGALACTURONASE protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 27169
95 % 3 3 22833
90 % 3 3 22159
70 % 3 3 20330
50 % 3 3 17614
40 % 3 9 2810
30 % 3 10 2534

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures