Sequence Similarity Clusters for the Entities in PDB 1KCC

Entity #1 | Chains: A
ENDOPOLYGALACTURONASE protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25400
95 % 2 3 21385 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 3 20788
70 % 2 3 19151
50 % 2 3 16650
40 % 2 9 2645
30 % 2 10 2389

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.