Sequence Similarity Clusters for the Entities in PDB 1KCA

Entity #1 | Chains: A,B,C,D,E,F,G,H
REPRESSOR PROTEIN CI protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 10389
95 % 2 2 7315 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 2 7278
70 % 2 2 7074
50 % 2 2 6548
40 % 2 2 6073
30 % 2 2 5317

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1F39 1 A, B REPRESSOR PROTEIN CI C-TERMINAL DOMAIN 10710
2 1KCA 1 A, B, C, D, E, F, G, H REPRESSOR PROTEIN CI C-terminal domain (residues 132-236) 10710