Sequence Similarity Clusters for the Entities in PDB 1KCA

Entity #1 | Chains: A,B,C,D,E,F,G,H
REPRESSOR PROTEIN CI protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 10315
95 % 2 2 7266 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 2 7233
70 % 2 2 7034
50 % 2 2 6507
40 % 2 2 6032
30 % 2 2 5287

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures