Sequence Similarity Clusters for the Entities in PDB 1KCA

Entity #1 | Chains: A,B,C,D,E,F,G,H
REPRESSOR PROTEIN CI protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9948
95 % 2 2 7484 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 2 7437
70 % 2 2 7241
50 % 2 2 6670
40 % 2 2 6216
30 % 2 2 5560

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures