Sequence Similarity Clusters for the Entities in PDB 1KCA

Entity #1 | Chains: A,B,C,D,E,F,G,H
REPRESSOR PROTEIN CI protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9750
95 % 2 2 7346 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 2 7298
70 % 2 2 7116
50 % 2 2 6554
40 % 2 2 6111
30 % 2 2 5464

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.