Sequence Similarity Clusters for the Entities in PDB 1KC8

Entity #1 | Chains: A
23S RRNA rna, length: 2922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
RIBOSOMAL PROTEIN L10E protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 20 2372
95 % 7 20 3005
90 % 7 20 3048
70 % 8 27 2114
50 % 51 74 692
40 % 51 79 676
30 % 51 79 677
Entity #11 | Chains: K
RIBOSOMAL PROTEIN L13 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 74 418
95 % 51 74 585
90 % 51 74 616
70 % 51 74 648
50 % 51 74 697
40 % 52 77 700
30 % 52 78 686
Entity #12 | Chains: L
RIBOSOMAL PROTEIN L14 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 44 827
95 % 51 68 660
90 % 51 68 689
70 % 51 68 734
50 % 54 175 201
40 % 54 175 223
30 % 87 509 31
Entity #13 | Chains: M
RIBOSOMAL PROTEIN L15 protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 74 417
95 % 51 74 584
90 % 51 74 615
70 % 51 74 645
50 % 51 74 693
40 % 51 74 732
30 % 86 491 37
Entity #14 | Chains: N
RIBOSOMAL PROTEIN L15E protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 20 2356
95 % 7 20 2985
90 % 7 20 3029
70 % 51 68 726
50 % 54 171 207
40 % 54 171 231
30 % 54 171 237
Entity #15 | Chains: O
RIBOSOMAL PROTEIN L18 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 74 415
95 % 51 74 582
90 % 51 74 613
70 % 51 74 642
50 % 51 76 664
40 % 51 76 707
30 % 51 79 675
Entity #16 | Chains: P
RIBOSOMAL PROTEIN L18E protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 68 469
95 % 51 68 661
90 % 51 68 691
70 % 51 68 736
50 % 51 70 757
40 % 51 70 793
30 % 51 70 784
Entity #17 | Chains: Q
RIBOSOMAL PROTEIN L19E protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 21 2168
95 % 51 68 659
90 % 51 68 687
70 % 51 68 732
50 % 51 68 784
40 % 51 72 759
30 % 51 72 751
Entity #18 | Chains: R
RIBOSOMAL PROTEIN L21E protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 68 471
95 % 51 68 664
90 % 51 68 693
70 % 51 68 739
50 % 51 70 759
40 % 51 70 795
30 % 51 71 766
Entity #19 | Chains: S
RIBOSOMAL PROTEIN L22 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 50 67 485
95 % 51 68 657
90 % 51 68 685
70 % 51 68 729
50 % 51 68 781
40 % 51 68 816
30 % 54 174 231
Entity #2 | Chains: B
5S RRNA rna, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: T
RIBOSOMAL PROTEIN L23 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 74 422
95 % 51 74 588
90 % 51 74 619
70 % 51 74 651
50 % 51 76 669
40 % 51 78 688
30 % 83 399 60
Entity #21 | Chains: U
RIBOSOMAL PROTEIN L24 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 74 421
95 % 51 74 587
90 % 51 74 618
70 % 51 74 650
50 % 54 179 196
40 % 54 179 216
30 % 54 179 226
Entity #22 | Chains: V
RIBOSOMAL PROTEIN L24E protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 48 70 448
95 % 48 70 631
90 % 48 70 660
70 % 48 70 709
50 % 48 70 760
40 % 48 70 798
30 % 48 70 788
Entity #23 | Chains: W
RIBOSOMAL PROTEIN L29 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 74 423
95 % 51 74 589
90 % 51 74 620
70 % 51 74 652
50 % 51 74 698
40 % 51 74 735
30 % 51 74 727
Entity #24 | Chains: X
RIBOSOMAL PROTEIN L30 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 68 467
95 % 51 68 658
90 % 51 68 686
70 % 51 68 730
50 % 51 68 782
40 % 51 70 790
30 % 51 71 763
Entity #25 | Chains: Y
RIBOSOMAL PROTEIN L31E protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 68 473
95 % 51 68 666
90 % 51 68 695
70 % 51 68 741
50 % 51 68 787
40 % 51 68 820
30 % 51 68 809
Entity #26 | Chains: Z
RIBOSOMAL PROTEIN L32E protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 47 63 541
95 % 47 63 751
90 % 47 63 779
70 % 47 63 823
50 % 47 63 866
40 % 47 63 888
30 % 47 63 875
Entity #27 | Chains: 1
RIBOSOMAL PROTEIN L37Ae protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 20 2434
95 % 7 20 3051
90 % 7 20 3093
70 % 8 21 2846
50 % 14 30 1900
40 % 17 128 299
30 % 38 151 269
Entity #28 | Chains: 2
RIBOSOMAL PROTEIN L37E protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 68 475
95 % 51 68 669
90 % 51 68 698
70 % 51 68 745
50 % 51 69 769
40 % 51 69 809
30 % 51 69 802
Entity #29 | Chains: 3
RIBOSOMAL PROTEIN L39E protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 20 2441
95 % 51 68 670
90 % 51 68 699
70 % 51 68 746
50 % 54 172 204
40 % 54 172 228
30 % 54 172 234
Entity #3 | Chains: C
RIBOSOMAL PROTEIN L2 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 21 2151
95 % 51 68 653
90 % 51 68 681
70 % 51 68 724
50 % 54 170 206
40 % 54 172 227
30 % 54 172 233
Entity #30 | Chains: 4
RIBOSOMAL PROTEIN L44E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 68 472
95 % 51 68 665
90 % 51 68 694
70 % 51 68 740
50 % 51 68 786
40 % 51 68 819
30 % 54 168 243
Entity #4 | Chains: D
RIBOSOMAL PROTEIN L3 protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 50 67 482
95 % 51 74 573
90 % 51 74 605
70 % 51 74 638
50 % 51 74 687
40 % 54 179 214
30 % 54 179 223
Entity #5 | Chains: E
RIBOSOMAL PROTEIN L4 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 44 820
95 % 51 74 578
90 % 51 74 611
70 % 51 74 641
50 % 51 74 689
40 % 51 76 705
30 % 52 78 683
Entity #6 | Chains: F
RIBOSOMAL PROTEIN L5 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 74 416
95 % 51 74 583
90 % 51 74 614
70 % 51 74 643
50 % 51 74 691
40 % 55 179 215
30 % 55 179 225
Entity #7 | Chains: G
RIBOSOMAL PROTEIN L6 protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 68 466
95 % 51 68 656
90 % 51 68 684
70 % 51 68 728
50 % 51 68 780
40 % 54 173 224
30 % 87 500 34
Entity #8 | Chains: H
RIBOSOMAL PROTEIN L7AE protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 21 2179
95 % 8 21 2814
90 % 51 68 690
70 % 51 68 735
50 % 73 105 321
40 % 80 122 277
30 % 80 124 279
Entity #9 | Chains: I
RIBOSOMAL PROTEIN L10 protein, length: 348 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 44 814
95 % 48 64 731
90 % 48 64 760
70 % 48 64 802
50 % 48 64 850
40 % 48 64 874
30 % 48 65 848

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.