Sequence Similarity Clusters for the Entities in PDB 1KC6

Entity #1 | Chains: E,F,G,H
5'-D(P*CP*CP*GP*GP*TP*CP*GP*AP*CP*CP*GP*G)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B,C,D
TYPE II RESTRICTION ENZYME HINCII protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 1719
95 % 16 18 1006
90 % 16 18 1024
70 % 16 18 1067
50 % 16 18 1108
40 % 16 18 1129
30 % 16 18 1115

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.