Sequence Similarity Clusters for the Entities in PDB 1KC5

Entity #1 | Chains: L
PC287 Immunoglobulin protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41759
95 % 2 2 31794 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 34 76 399
70 % 1158 2426 1
50 % 2367 4913 1
40 % 2367 4913 1
30 % 2683 5780 1
Entity #2 | Chains: H
PC287 Immunoglobulin protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41461
95 % 2 2 31621 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 8 18 2644
70 % 1147 2376 2
50 % 2368 4913 1
40 % 2368 4913 1
30 % 2684 5780 1
Entity #3 | Chains: P
PS1 peptide protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures