Sequence Similarity Clusters for the Entities in PDB 1KC5

Entity #1 | Chains: L
PC287 Immunoglobulin protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42264
95 % 2 2 32166 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 35 77 405
70 % 1184 2474 1
50 % 2420 5011 1
40 % 2420 5011 1
30 % 2777 5941 1
Entity #2 | Chains: H
PC287 Immunoglobulin protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41965
95 % 2 2 31994 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 8 18 2676
70 % 1173 2424 2
50 % 2421 5011 1
40 % 2421 5011 1
30 % 2778 5941 1
Entity #3 | Chains: P
PS1 peptide protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures