Sequence Similarity Clusters for the Entities in PDB 1KC5

Entity #1 | Chains: L
PC287 Immunoglobulin protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 37725
95 % 2 2 32035 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 7 12 3397
70 % 1211 2553 1
50 % 2480 5180 1
40 % 2836 5834 1
30 % 3453 7269 1
Entity #2 | Chains: H
PC287 Immunoglobulin protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 43719
95 % 2 2 36567 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 8 19 2551
70 % 1203 2511 2
50 % 2481 5180 1
40 % 2837 5834 1
30 % 3454 7269 1
Entity #3 | Chains: P
PS1 peptide protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures