Sequence Similarity Clusters for the Entities in PDB 1KC5

Entity #1 | Chains: L
PC287 Immunoglobulin protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40864
95 % 2 2 31165 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 33 73 395
70 % 1100 2329 1
50 % 2250 4717 1
40 % 2250 4717 1
30 % 2556 5571 1
Entity #2 | Chains: H
PC287 Immunoglobulin protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40575
95 % 2 2 30998 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 8 17 2867
70 % 1091 2282 2
50 % 2251 4717 1
40 % 2251 4717 1
30 % 2557 5571 1
Entity #3 | Chains: P
PS1 peptide protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.