Sequence Similarity Clusters for the Entities in PDB 1KC5

Entity #1 | Chains: L
PC287 Immunoglobulin protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39698
95 % 2 2 30287 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 33 67 424
70 % 875 1845 2
50 % 2176 4545 1
40 % 2176 4545 1
30 % 2467 5350 1
Entity #2 | Chains: H
PC287 Immunoglobulin protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39417
95 % 2 2 30128 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 8 17 2778
70 % 1057 2201 1
50 % 2177 4545 1
40 % 2177 4545 1
30 % 2468 5350 1
Entity #3 | Chains: P
PS1 peptide protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.