Sequence Similarity Clusters for the Entities in PDB 1KBY

Entity #1 | Chains: L
PHOTOSYNTHETIC REACTION CENTER PROTEIN L CHAIN protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 68 404
95 % 33 97 334
90 % 33 97 360
70 % 33 97 398
50 % 48 126 328
40 % 48 126 352
30 % 48 126 359
Entity #2 | Chains: M
PHOTOSYNTHETIC REACTION CENTER PROTEIN M CHAIN protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 34468
95 % 33 97 333
90 % 33 97 359
70 % 33 97 396
50 % 48 126 327
40 % 48 126 350
30 % 48 126 357
Entity #3 | Chains: H
PHOTOSYNTHETIC REACTION CENTER PROTEIN H CHAIN protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 96 240
95 % 33 97 335
90 % 33 97 361
70 % 33 97 399
50 % 33 97 467
40 % 48 126 353
30 % 48 126 360

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.