Sequence Similarity Clusters for the Entities in PDB 1KBW

Entity #1 | Chains: A,B,C,D,E,F
Major outer membrane protein PAN 1 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 4906
95 % 3 4 2509 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 3 4 2570
70 % 3 4 2560
50 % 3 4 2544
40 % 3 4 2508
30 % 139 146 181

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures