Sequence Similarity Clusters for the Entities in PDB 1KBW

Entity #1 | Chains: A,B,C,D,E,F
Major outer membrane protein PAN 1 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 5996
95 % 3 4 2680 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 3 4 2749
70 % 3 4 2722
50 % 3 4 2696
40 % 3 4 2627
30 % 156 163 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures