Sequence Similarity Clusters for the Entities in PDB 1KBV

Entity #1 | Chains: A,B,C,D,E,F
Major outer membrane protein PAN 1 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 4948
95 % 2 4 2537 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 2 4 2597
70 % 2 4 2588
50 % 2 4 2569
40 % 2 4 2530
30 % 118 146 184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures