Sequence Similarity Clusters for the Entities in PDB 1KBQ

Entity #1 | Chains: A,B,C,D
NAD(P)H dehydrogenase [quinone] 1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 12 547
95 % 2 16 617 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 2 16 646
70 % 2 18 622
50 % 2 18 668
40 % 2 18 698
30 % 2 18 694

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures