Sequence Similarity Clusters for the Entities in PDB 1KBQ

Entity #1 | Chains: A,B,C,D
NAD(P)H dehydrogenase [quinone] 1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 12 632
95 % 2 16 636 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 2 16 660
70 % 2 18 655
50 % 2 18 705
40 % 2 18 735
30 % 2 18 738

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures