Sequence Similarity Clusters for the Entities in PDB 1KBO

Entity #1 | Chains: A,B,C,D
NAD(P)H dehydrogenase [quinone] 1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 12 534
95 % 9 16 606 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 9 16 635
70 % 10 18 613
50 % 10 18 656
40 % 10 18 690
30 % 10 18 687

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1D4A 1 A, B, C, D QUINONE REDUCTASE 9606 1.6.5.2 | Details
2 1KBQ 1 A, B, C, D NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
3 5FUQ 1 A, B NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
4 5EA2 1 A, C, E, G NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
5 1H69 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
6 5A4K 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
7 4CET 1 A NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
8 1H66 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
9 1QRD 1 A, B QUINONE-REDUCTASE 10117 1.6.5.2 | Details
10 1KBO 1 A, B, C, D NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
11 1QBG 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
12 1GG5 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
13 3JSX 1 A, B, C, D, E, F, G, H NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
14 1DXO 1 A, B, C, D QUINONE REDUCTASE 9606 1.6.5.2 | Details
15 4CF6 1 A, B NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
16 5EAI 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
17 1DXQ 1 A, B, C, D QUINONE REDUCTASE 10090 1.6.5.2 | Details
18 2F1O 1 A, B, C, D, E, F, G, H NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details