Sequence Similarity Clusters for the Entities in PDB 1KBO

Entity #1 | Chains: A,B,C,D
NAD(P)H dehydrogenase [quinone] 1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 12 565
95 % 9 16 632 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 9 16 660
70 % 10 18 653
50 % 10 18 700
40 % 10 18 731
30 % 10 18 728

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1D4A 1 A, B, C, D QUINONE REDUCTASE 9606 1.6.5.2 | Details
2 1KBQ 1 A, B, C, D NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
3 5FUQ 1 A, B NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
4 5EA2 1 A, C, E, G NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
5 1H69 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
6 5A4K 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
7 4CET 1 A NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
8 1H66 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
9 1QRD 1 A, B QUINONE-REDUCTASE 10117 1.6.5.2 | Details
10 1KBO 1 A, B, C, D NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
11 1QBG 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
12 1GG5 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
13 3JSX 1 A, B, C, D, E, F, G, H NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
14 1DXO 1 A, B, C, D QUINONE REDUCTASE 9606 1.6.5.2 | Details
15 4CF6 1 A, B NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
16 5EAI 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
17 1DXQ 1 A, B, C, D QUINONE REDUCTASE 10090 1.6.5.2 | Details
18 2F1O 1 A, B, C, D, E, F, G, H NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details