Sequence Similarity Clusters for the Entities in PDB 1KBO

Entity #1 | Chains: A,B,C,D
NAD(P)H dehydrogenase [quinone] 1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 12 650
95 % 9 16 659 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.4
PDBFlex
90 % 9 16 681
70 % 10 18 667
50 % 10 18 720
40 % 10 18 750
30 % 10 18 759

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1D4A 1 A, B, C, D QUINONE REDUCTASE 9606 1.6.5.2 | Details
2 1KBQ 1 A, B, C, D NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
3 5EA2 1 A, C, E, G NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
4 1H69 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
5 1H66 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
6 1KBO 1 A, B, C, D NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
7 1QBG 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
8 1GG5 1 A, B, C, D NAD(P)H DEHYDROGENASE [QUINONE] 1 9606 1.6.5.2 | Details
9 3JSX 1 A, B, C, D, E, F, G, H NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
10 1DXO 1 A, B, C, D QUINONE REDUCTASE 9606 1.6.5.2 | Details
11 5EAI 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details
12 2F1O 1 A, B, C, D, E, F, G, H NAD(P)H dehydrogenase [quinone] 1 9606 1.6.5.2 | Details