Sequence Similarity Clusters for the Entities in PDB 1KBO

Entity #1 | Chains: A,B,C,D
NAD(P)H dehydrogenase [quinone] 1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 12 563
95 % 9 16 629 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 9 16 657
70 % 10 18 648
50 % 10 18 695
40 % 10 18 728
30 % 10 18 724

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures