Sequence Similarity Clusters for the Entities in PDB 1KBH

Entity #1 | Chains: A
nuclear receptor coactivator protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73764
95 % 1 1 51295
90 % 1 1 48656
70 % 1 1 42680
50 % 1 1 36406
40 % 1 1 32043
30 % 1 1 27097
Entity #2 | Chains: B
CREB-BINDING PROTEIN protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 24607
95 % 4 4 21003
90 % 4 4 20415
70 % 4 4 18755
50 % 4 4 16293
40 % 4 4 14532
30 % 4 4 12439

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures