Sequence Similarity Clusters for the Entities in PDB 1KBH

Entity #1 | Chains: A
nuclear receptor coactivator protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53007
95 % 1 1 43660
90 % 1 1 41544
70 % 1 1 36659
50 % 1 1 31115
40 % 1 1 26329
30 % 1 1 21968
Entity #2 | Chains: B
CREB-BINDING PROTEIN protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 19152
95 % 4 4 17490
90 % 4 4 17073
70 % 4 4 15827
50 % 4 4 13873
40 % 4 4 12400
30 % 4 4 10456

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures