Sequence Similarity Clusters for the Entities in PDB 1KBC

Entity #1 | Chains: A,B
NEUTROPHIL COLLAGENASE protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 24 1824
95 % 9 25 2061 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 9 25 2104
70 % 9 25 2106
50 % 86 237 106
40 % 88 241 127
30 % 88 241 137

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures