Sequence Similarity Clusters for the Entities in PDB 1KB9

Entity #1 | Chains: A
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I protein, length: 431 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 7866
95 % 2 8 6157
90 % 2 8 6144
70 % 2 8 6005
50 % 2 8 5616
40 % 2 8 5268
30 % 5 58 591
Entity #10 | Chains: J
HEAVY CHAIN (VH) OF FV-FRAGMENT protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 5717
95 % 2 8 6379
90 % 2 8 6359
70 % 24 39 1081
50 % 292 547 8
40 % 479 895 5
30 % 538 1021 7
Entity #11 | Chains: K
LIGHT CHAIN (VL) OF FV-FRAGMENT protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 5745
95 % 2 8 6400
90 % 2 8 6378
70 % 108 188 71
50 % 167 303 21
40 % 480 895 5
30 % 539 1021 7
Entity #2 | Chains: B
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 protein, length: 352 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 5527
95 % 2 8 6198
90 % 2 8 6179
70 % 2 8 6035
50 % 2 8 5650
40 % 2 8 5295
30 % 2 8 4755
Entity #3 | Chains: C
CYTOCHROME B protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 11518
95 % 2 8 6178
90 % 2 8 6164
70 % 2 8 6022
50 % 5 57 561
40 % 5 65 442
30 % 5 65 442
Entity #4 | Chains: D
CYTOCHROME C1, HEME PROTEIN protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 5594
95 % 2 8 6262
90 % 2 8 6240
70 % 2 8 6105
50 % 5 54 608
40 % 5 54 640
30 % 5 62 461
Entity #5 | Chains: E
UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 5658
95 % 2 8 6322
90 % 2 8 6302
70 % 2 8 6156
50 % 5 52 653
40 % 5 60 483
30 % 5 60 481
Entity #6 | Chains: F
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 17 KD PROTEIN protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 10680
95 % 1 6 10681
90 % 1 6 10550
70 % 1 6 10037
50 % 1 6 9092
40 % 1 6 8323
30 % 1 6 7326
Entity #7 | Chains: G
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 5719
95 % 2 8 6381
90 % 2 8 6361
70 % 2 8 6211
50 % 2 8 5804
40 % 2 8 5434
30 % 2 8 4879
Entity #8 | Chains: H
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX UBIQUINONE-BINDING PROTEIN QP-C protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 5755
95 % 2 8 6409
90 % 2 8 6387
70 % 2 8 6236
50 % 2 8 5828
40 % 2 8 5454
30 % 2 8 4903
Entity #9 | Chains: I
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.3 KD PROTEIN protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 24149
95 % 1 5 13263
90 % 1 5 13062
70 % 1 5 12308
50 % 1 5 10992
40 % 1 5 9976
30 % 1 5 8697

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.