Sequence Similarity Clusters for the Entities in PDB 1KB5

Entity #1 | Chains: A
KB5-C20 T-CELL ANTIGEN RECEPTOR protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 29717
95 % 1 2 24648
90 % 1 2 23834
70 % 3 5 7802
50 % 3 5 7178
40 % 599 936 5
30 % 669 1065 7
Entity #2 | Chains: B
KB5-C20 T-CELL ANTIGEN RECEPTOR protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 29686
95 % 1 2 24624
90 % 1 2 23811
70 % 2 5 12339
50 % 2 5 11006
40 % 2 5 9973
30 % 670 1065 7
Entity #3 | Chains: L
ANTIBODY DESIRE-1 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61530
95 % 14 26 1050
90 % 19 37 779
70 % 1333 2392 1
50 % 2720 4843 1
40 % 2720 4843 1
30 % 3122 5705 1
Entity #4 | Chains: H
ANTIBODY DESIRE-1 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60918
95 % 1 1 42786
90 % 1 1 40754
70 % 1317 2342 2
50 % 2721 4843 1
40 % 2721 4843 1
30 % 3123 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures