Sequence Similarity Clusters for the Entities in PDB 1KAT

Entity #1 | Chains: V,W
Vascular Endothelial Growth Factor protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 29 343
95 % 34 34 370
90 % 34 34 398
70 % 36 36 420
50 % 39 39 478
40 % 43 43 489
30 % 48 48 453
Entity #2 | Chains: X,Y
Phage-Derived Peptide Antagonist protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.