Sequence Similarity Clusters for the Entities in PDB 1KAT

Entity #1 | Chains: V,W
Vascular Endothelial Growth Factor protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 30 400
95 % 35 35 453
90 % 35 35 490
70 % 37 37 495
50 % 40 40 516
40 % 44 44 525
30 % 49 49 486
Entity #2 | Chains: X,Y
Phage-Derived Peptide Antagonist protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures