Sequence Similarity Clusters for the Entities in PDB 1KAT

Entity #1 | Chains: V,W
Vascular Endothelial Growth Factor protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 33 404
95 % 35 35 461
90 % 35 35 497
70 % 37 37 510
50 % 40 40 533
40 % 44 44 541
30 % 49 49 497
Entity #2 | Chains: X,Y
Phage-Derived Peptide Antagonist protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures