Sequence Similarity Clusters for the Entities in PDB 1KAP

Entity #1 | Chains: P
ALKALINE PROTEASE protein, length: 479 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 14579
95 % 1 4 13802
90 % 1 4 13582
70 % 1 4 12775
50 % 3 28 2030
40 % 3 28 2030
30 % 3 28 1957
Entity #2 | Chains: I
TETRAPEPTIDE (GLY SER ASN SER) protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures