Sequence Similarity Clusters for the Entities in PDB 1KAP

Entity #1 | Chains: P
ALKALINE PROTEASE protein, length: 479 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15890
95 % 1 4 14773 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 1 4 14477
70 % 1 4 13549
50 % 3 28 2181
40 % 3 28 2166
30 % 3 28 2040
Entity #2 | Chains: I
TETRAPEPTIDE (GLY SER ASN SER) protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures