Sequence Similarity Clusters for the Entities in PDB 1KAF

Entity #1 | Chains: A,B,C,D,E,F
Transcription regulatory protein MOTA protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13786
95 % 1 1 13109 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 1 1 12898
70 % 1 1 12144
50 % 1 1 10828
40 % 1 1 9826
30 % 1 1 8557

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.