Sequence Similarity Clusters for the Entities in PDB 1KA9

Entity #1 | Chains: H
imidazole glycerol phosphate synthase protein, length: 200 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62453
95 % 1 1 43573
90 % 1 1 41372
70 % 1 1 36396
50 % 1 1 31014
40 % 1 1 27353
30 % 2 7 3766
Entity #2 | Chains: F
imidazole glycerol phosphate synthase protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59000
95 % 1 1 41768
90 % 1 1 39875
70 % 2 2 20428
50 % 25 30 1000
40 % 25 30 1023
30 % 57 68 528

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures