Sequence Similarity Clusters for the Entities in PDB 1KA9

Entity #1 | Chains: H
imidazole glycerol phosphate synthase protein, length: 200 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53040
95 % 1 1 43684
90 % 1 1 41563
70 % 1 1 36678
50 % 1 1 31126
40 % 1 1 27283
30 % 2 7 3717
Entity #2 | Chains: F
imidazole glycerol phosphate synthase protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53041
95 % 1 1 43685
90 % 1 1 41564
70 % 2 2 20707
50 % 25 30 1018
40 % 25 32 996
30 % 57 70 546

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures