Sequence Similarity Clusters for the Entities in PDB 1KA8

Entity #1 | Chains: A,B,C,D,E,F
putative P4-specific DNA primase protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13853
95 % 1 1 13164 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 12949
70 % 1 1 12195
50 % 1 1 10874
40 % 1 1 9866
30 % 1 1 8593

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.