Sequence Similarity Clusters for the Entities in PDB 1KA8

Entity #1 | Chains: A,B,C,D,E,F
putative P4-specific DNA primase protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13641
95 % 1 1 12957 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 1 12745
70 % 1 1 11963
50 % 1 1 10678
40 % 1 1 9687
30 % 1 1 8432

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.