Sequence Similarity Clusters for the Entities in PDB 1KA4

Entity #1 | Chains: A
M32 carboxypeptidase protein, length: 499 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 13030
95 % 3 3 12403 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 3 12215
70 % 3 3 11534
50 % 3 3 10307
40 % 3 3 9315
30 % 9 9 2491

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures