Sequence Similarity Clusters for the Entities in PDB 1K9Q

Entity #1 | Chains: A
65 kDa Yes-associated protein protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 49771
95 % 4 6 13719
90 % 4 6 13507
70 % 4 6 12699
50 % 33 36 1567
40 % 52 56 999
30 % 52 56 976
Entity #2 | Chains: B
WW domain binding protein-1 protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures