Sequence Similarity Clusters for the Entities in PDB 1K9O

Entity #1 | Chains: I
ALASERPIN protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52588
95 % 1 1 38170
90 % 2 2 25709
70 % 2 2 23389
50 % 2 2 20163
40 % 40 97 366
30 % 53 178 180
Entity #2 | Chains: E
TRYPSIN II ANIONIC protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10187
95 % 24 36 1310 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 24 36 1338
70 % 468 526 18
50 % 547 677 14
40 % 1201 1682 4
30 % 1291 1831 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.