Sequence Similarity Clusters for the Entities in PDB 1K9O

Entity #1 | Chains: I
ALASERPIN protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54036
95 % 1 1 39244
90 % 2 2 26469
70 % 2 2 23963
50 % 2 2 20617
40 % 40 97 395
30 % 53 178 184
Entity #2 | Chains: E
TRYPSIN II ANIONIC protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10479
95 % 24 36 1341 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 24 36 1367
70 % 474 532 19
50 % 553 683 14
40 % 1209 1698 4
30 % 1299 1848 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures