Sequence Similarity Clusters for the Entities in PDB 1K9O

Entity #1 | Chains: I
ALASERPIN protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59228
95 % 1 1 48410
90 % 2 2 32380
70 % 2 2 28920
50 % 2 2 24733
40 % 54 132 259
30 % 65 193 182
Entity #2 | Chains: E
TRYPSIN II ANIONIC protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 22 2014
95 % 24 36 1392 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 24 36 1417
70 % 495 558 19
50 % 573 708 14
40 % 1317 1873 4
30 % 1324 1887 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures