Sequence Similarity Clusters for the Entities in PDB 1K9J

Entity #1 | Chains: A,B
mDC-SIGN2 TYPE I ISOFORM protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28719
95 % 2 2 23839 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.1
PDBFlex
90 % 2 2 23058
70 % 3 4 13505
50 % 3 5 7022
40 % 3 5 6520
30 % 73 220 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.