Sequence Similarity Clusters for the Entities in PDB 1K9I

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
mDC-SIGN1B type I isoform protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 4493
95 % 5 5 4973 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.6
PDBFlex
90 % 5 5 4993
70 % 5 5 4866
50 % 5 5 4658
40 % 5 5 4423
30 % 151 220 104

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures