Sequence Similarity Clusters for the Entities in PDB 1K8Y

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE ALPHA CHAIN protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 48 779
95 % 7 61 809 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 7 61 846
70 % 7 65 768
50 % 7 68 687
40 % 8 93 332
30 % 8 95 333
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE BETA CHAIN protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 25767
95 % 7 63 782 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 7 63 810
70 % 7 64 833
50 % 7 85 333
40 % 7 85 352
30 % 7 86 351

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.