Sequence Similarity Clusters for the Entities in PDB 1K8X

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE, ALPHA PROTEIN protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 12455
95 % 37 61 807 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 37 61 844
70 % 37 65 767
50 % 37 68 687
40 % 40 93 329
30 % 40 95 330
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE, BETA PROTEIN protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 25 31 1331
95 % 37 63 781 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 37 63 809
70 % 37 64 833
50 % 42 85 330
40 % 42 85 351
30 % 42 86 350

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.