Sequence Similarity Clusters for the Entities in PDB 1K8W

Entity #1 | Chains: B
5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*UP*(FHU)P*CP*GP*AP*UP*CP*CP*CP*GP*UP*UP*GP*C)-3' rna, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
tRNA Pseudouridine Synthase B protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52799
95 % 1 3 21065
90 % 1 3 20492
70 % 1 3 18901
50 % 1 3 16453
40 % 1 3 14697
30 % 1 3 12595

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.