Sequence Similarity Clusters for the Entities in PDB 1K8U

Entity #1 | Chains: A
S100A6 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48069
95 % 1 7 8015 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 2.5
PDBFlex
90 % 1 12 3529
70 % 1 12 3460
50 % 2 102 215
40 % 2 130 160
30 % 3 142 165

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4PE0 1 A, X Protein S100-B 9913
2 1K8U 1 A S100A6 9606
3 5ER5 1 A Protein S100-B 9913
4 4DUQ 1 A, B Protein S100-A2 9606
5 5D7F 1 A, B Protein S100-B 9606
6 3RM1 1 A Protein S100-B 9913
7 4CFQ 1 A, B, C, D PROTEIN S100-A4 RESIDUES 1-88 9606
8 4CFR 1 A, B PROTEIN S100-A4 RESDIUES 1-101 9606
9 3CZT 1 X Protein S100-B 9606
10 3NSL 1 A, B, C, D, E, F Protein S100-A3 9606
11 3NSO 1 A, B Protein S100-A3 9606
12 1K96 1 A S100A6 9606
13 3C1V 1 A, B, C, D Protein S100-A4 9606
14 3IQO 1 A, B Protein S100-B 9913
15 5DKN 1 A Protein S100-B 9913
16 3D0Y 1 A Protein S100-B 9606
17 3D0Y 2 B Protein S100-B 9606
18 3NSK 1 A, B Protein S100-A3 9606
19 4GGF 1 A, K, S, U Protein S100-A8 9606
20 4ETO 1 A, B Protein S100-A4 UNP residues 1-93 9606
21 2RGI 1 A, B Protein S100-A2 9606
22 4PE7 1 A Protein S100-B 9913
23 2Q91 1 A, B S100A4 Metastasis Factor 9606
24 5DKQ 1 A Protein S100-B 9913
25 4PE1 1 A, B Protein S100-B 9913
26 4FQO 1 A Protein S100-B 9913
27 2WCE 1 A, B PROTEIN S100-A12 RESIDUES 2-92 9606
28 1XK4 1 A, B, E, F, I, J Calgranulin A 9606
29 1KSO 1 A, B S100 CALCIUM-BINDING PROTEIN A3 9606
30 3D10 1 A, B Protein S100-B 9606
31 1K9K 1 A, B S100A6 9606
32 4XJK 1 A, C, E, G, I Protein S100-A8 9606
33 5ER4 1 X Protein S100-B 9913
34 5DKR 1 A, B Protein S100-B 9913
35 3LK1 1 A Protein S100-B 9913
36 2WC8 1 A, B, C, D PROTEIN S100-A12 RESIDUES 2-92 9606
37 2H61 1 A, B, E, F, H Protein S100-B MET at the N-terminus 9606
38 2H61 2 C, D, G Protein S100-B FME at the N-terminus 9606
39 1K9P 1 A S100A6 9606
40 2WCB 1 A, B PROTEIN S100-A12 RESIDUES 2-92 9606
41 4PDZ 1 A, B Protein S100-B 9913
42 3CR5 1 X Protein S100-B 9913
43 3LLE 1 A, B Protein S100-B 9913
44 3ZWH 1 A, B PROTEIN S100-A4 9606
45 1MR8 1 A, B MIGRATION INHIBITORY FACTOR-RELATED PROTEIN 8 9606
46 1E8A 1 A, B S100A12 9606
47 2Y5I 1 A, B, C, D, E, F S100 CALCIUM BINDING PROTEIN Z 7955
48 3GK4 1 X Protein S100-B 9913
49 3CR2 1 A Protein S100-B 9913
50 1MHO 1 A S-100 PROTEIN BETA CHAIN 9913
51 5HLO 1 A, B, C, D Protein S100-A8 9606
52 5LPU 2 C, D Protein S100-A4 9606
53 6DS2 1 A, C, E, G Protein S100-A8 9606
54 3RLZ 1 A, B Protein S100-B 9913
55 1J55 1 A S-100P PROTEIN 9606
56 3GK2 1 A Protein S100-B 9913
57 3IQQ 1 A Protein S100-B 9913
58 5HLV 1 A, B, C, D, E, F, G, H Protein S100-A8 9606
59 3HCM 1 A, B Protein S100-B 9606
60 1ODB 1 A, B, C, D, E, F CALGRANULIN C CA2+ AND CU2+ BOUND FORM 9606
61 3GK1 1 A Protein S100-B 9913
62 5CSI 1 A, B Protein S100-B 9606
63 3NSI 1 A, B Protein S100-A3 9606
64 3CR4 1 X Protein S100-B 9913
65 3LK0 1 A, B, C, D Protein S100-B 9913
66 4P2Y 2 B Protein S100-A6 10090
67 4PE4 1 A, X Protein S100-B 9913
68 3CGA 1 A, B Protein S100-A4 9606
69 3KO0 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T Protein S100-A4 9606
70 5HYD 1 A, B, C, D Protein S100-Z 9606
71 1QLS 1 A S100C PROTEIN 9823
72 4YBH 2 B Protein S100-A6 9606
73 4FTG 1 A, B Protein S100-A10 9606
74 4HSZ 1 A, B, C, D Protein S100-A4 UNP residues 1-93 9606
75 1A4P 1 A, B S100A10 9606
76 4XYN 2 A, B, C, D Protein S100-B 9606
77 1BT6 1 A, B S100A10 9606
78 5CSF 1 A, B Protein S100-B 9606
79 5K89 1 A, C, H Protein S100-A1 9606
80 5CSJ 1 A, B Protein S100-B 9606
81 5W1F 1 A, C, E, G Protein S100-A8 9606
82 1GQM 1 A, B, C, D, E, F, G, H, I, J, K, L CALGRANULIN C 9606
83 4DIR 1 A, B Protein S100-A5 9606
84 2WCF 1 A, B, C, D, E, F PROTEIN S100-A12 RESIDUES 2-92 9606
85 3M0W 1 A, B, C, D, E, F, G, H, I, J Protein S100-A4 9606
86 4HRE 2 E, F, I, J Protein S100-A10 9606
87 5CSN 1 A, B Protein S100-B 9606
88 2MRD 1 A, B Protein S100-A4 9606
89 2MJW 2 B, D Protein S100-P UNP RESIDUES 1-94 9606
90 2M9G 1 A, B Protein S100-A12 9606
91 2M49 2 B, D Protein S100-B 9606
92 2M3W 1 A, B Protein S100-A1 9606
93 2M1K 1 B, D Protein S100-A6 9606
94 2LUX 1 A, B Protein S100-A1 9606
95 2LUC 1 A, B Protein S100-A11 9606
96 2LP2 1 A, B Protein S100-A1 9606
97 2LP3 1 A, B Protein S100-A1 9606
98 2LNK 2 A, B Protein S100-A4 9606
99 2LLS 1 A, B Protein S100-A1 9606
100 2LLT 1 A, B Protein S100-A1 9606
101 2LLU 1 A, B Protein S100-A1 9606
102 2LHL 1 A, B Protein S100-A1 9606
103 2L0P 1 A, B S100 calcium binding protein A1 UNP residues 54-147 9606
104 2KBM 2 A, B Protein S100-A1 10116
105 2KAX 1 A, B Protein S100-A5 9606
106 2KAY 1 A, B Protein S100-A5 9606
107 2K7O 1 A, B Protein S100-B 10116
108 2K2F 2 A, B Protein S100-A1 10116
109 2JTT 1 A, B Protein S100-A6 9986
110 2JPT 1 A, B Protein S100-A1 9913
111 2PRU 1 A, B Protein S100-B 9606
112 1ZFS 1 A, B S-100 protein, alpha chain 10116
113 1XYD 1 A, B S-100 protein, beta chain 10116
114 1PSB 1 A, B S-100 protein, beta chain 9913
115 1OZO 1 A, B S-100P protein 9606
116 1NSH 1 A, B Calgizzarin 9986
117 1MWN 1 A, B S-100 protein, beta chain 10116
118 1MQ1 1 A, B S-100 protein, beta chain 9606
119 1M31 1 A, B Placental calcium-binding protein 9606
120 1K2H 1 A, B S-100 protein, alpha chain 10116
121 1JWD 1 A, B Calcyclin 9986
122 1DT7 1 A, B S100 CALCIUM-BINDING PROTEIN BETA CHAIN 10116
123 2CNP 1 A, B CALCYCLIN 9986
124 1B4C 1 A, B PROTEIN (S-100 PROTEIN, BETA CHAIN) S100B IS A HOMODIMER OF S100BETA SUBUNITS 10116
125 1A03 1 A, B CALCYCLIN (RABBIT, CA2+) RABBIT, CA2+ 9986
126 1UWO 1 A, B S100B 9606
127 1QLK 1 A, B S-100 PROTEIN SUBUNITS A AND B 10116
128 1CFP 1 A, B S100B 9913
129 1SYM 1 A, B S100B SYMMETRIC DIMER OF APO-S100BETA SUBUNITS, JOINED BY NONCOVALENT INTERACTION AT THE DIMER INTERFACE 10116
130 1CNP 1 A, B CALCYCLIN (RABBIT, APO) PH 7.0, 300 K 9986