Sequence Similarity Clusters for the Entities in PDB 1K8R

Entity #1 | Chains: A
Transforming protein P21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 52 57 571
95 % 131 142 221 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.6
PDBFlex
90 % 178 192 127
70 % 178 192 145
50 % 221 238 131
40 % 380 424 27
30 % 655 750 16
Entity #2 | Chains: B
Protein kinase byr2 protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66196
95 % 1 1 45600
90 % 1 1 43308
70 % 1 1 38094
50 % 1 1 32534
40 % 1 1 28740
30 % 1 1 24294

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.