Sequence Similarity Clusters for the Entities in PDB 1K8I

Entity #1 | Chains: A
MHC class II H2-M alpha chain protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58574
95 % 1 1 40810
90 % 1 1 38850
70 % 6 6 8280
50 % 6 6 7531
40 % 6 6 6919
30 % 239 296 100
Entity #2 | Chains: B
MHC class II H2-M beta 2 chain protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58575
95 % 1 1 40811
90 % 1 1 38851
70 % 6 6 8281
50 % 6 6 7532
40 % 6 6 6920
30 % 240 296 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.