Sequence Similarity Clusters for the Entities in PDB 1K8I

Entity #1 | Chains: A
MHC class II H2-M alpha chain protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60289
95 % 1 1 42029
90 % 1 1 39963
70 % 6 6 8557
50 % 6 6 7751
40 % 6 6 7120
30 % 245 304 99
Entity #2 | Chains: B
MHC class II H2-M beta 2 chain protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60290
95 % 1 1 42030
90 % 1 1 39964
70 % 6 6 8558
50 % 6 6 7752
40 % 6 6 7121
30 % 246 304 99

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.