Sequence Similarity Clusters for the Entities in PDB 1K8I

Entity #1 | Chains: A
MHC class II H2-M alpha chain protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57048
95 % 1 1 39742
90 % 1 1 37849
70 % 6 6 8064
50 % 6 6 7332
40 % 6 6 6764
30 % 235 292 94
Entity #2 | Chains: B
MHC class II H2-M beta 2 chain protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57049
95 % 1 1 39743
90 % 1 1 37850
70 % 6 6 8065
50 % 6 6 7333
40 % 6 6 6765
30 % 236 292 94

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.