Sequence Similarity Clusters for the Entities in PDB 1K8D

Entity #1 | Chains: A
QA-2 antigen protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55960
95 % 1 1 39837
90 % 1 1 38087
70 % 443 684 6
50 % 444 689 6
40 % 476 739 10
30 % 511 856 15
Entity #2 | Chains: B
BETA-2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 74 133 95
95 % 104 215 64
90 % 104 215 68
70 % 539 875 4
50 % 551 897 4
40 % 551 897 9
30 % 551 897 14
Entity #3 | Chains: P
60S RIBOSOMAL PROTEIN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.