Sequence Similarity Clusters for the Entities in PDB 1K8D

Entity #1 | Chains: A
QA-2 antigen protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57479
95 % 1 1 40940
90 % 1 1 39097
70 % 459 719 6
50 % 460 724 6
40 % 493 775 10
30 % 534 899 15
Entity #2 | Chains: B
BETA-2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 74 135 96
95 % 112 228 60
90 % 112 228 65
70 % 559 916 4
50 % 571 938 3
40 % 571 938 7
30 % 571 938 12
Entity #3 | Chains: P
60S RIBOSOMAL PROTEIN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures