Sequence Similarity Clusters for the Entities in PDB 1K8D

Entity #1 | Chains: A
QA-2 antigen protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53967
95 % 1 1 38385
90 % 1 1 36746
70 % 427 656 7
50 % 428 661 7
40 % 458 709 11
30 % 493 826 14
Entity #2 | Chains: B
BETA-2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 72 131 93
95 % 101 212 65
90 % 101 212 70
70 % 526 856 5
50 % 536 876 4
40 % 536 876 9
30 % 536 876 13
Entity #3 | Chains: P
60S RIBOSOMAL PROTEIN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.