Sequence Similarity Clusters for the Entities in PDB 1K8D

Entity #1 | Chains: A
QA-2 antigen protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64145
95 % 1 1 52071
90 % 1 1 49383
70 % 473 740 6
50 % 482 754 7
40 % 509 806 9
30 % 550 930 12
Entity #2 | Chains: B
BETA-2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 91 189 81
95 % 112 234 62
90 % 112 234 66
70 % 572 944 4
50 % 584 966 3
40 % 584 966 6
30 % 584 966 9
Entity #3 | Chains: P
60S RIBOSOMAL PROTEIN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures