Sequence Similarity Clusters for the Entities in PDB 1K7L

Entity #1 | Chains: A,C,E,G
Peroxisome proliferator activated receptor alpha protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 16 1614
95 % 15 18 1792 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.8
PDBFlex
90 % 15 18 1835
70 % 48 57 406
50 % 179 212 103
40 % 179 212 127
30 % 799 936 10
Entity #2 | Chains: B,D,F,H
steroid receptor coactivator protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 15573
95 % 2 2 14605
90 % 2 2 14329
70 % 2 2 13444
50 % 2 2 11973
40 % 2 2 10852
30 % 2 2 9416

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.