Sequence Similarity Clusters for the Entities in PDB 1K7L

Entity #1 | Chains: A,C,E,G
Peroxisome proliferator activated receptor alpha protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 16 1679
95 % 15 18 1860 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.8
PDBFlex
90 % 15 18 1904
70 % 48 57 415
50 % 184 217 104
40 % 184 217 129
30 % 844 983 10
Entity #2 | Chains: B,D,F,H
steroid receptor coactivator protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 16087
95 % 2 2 15080
90 % 2 2 14797
70 % 2 2 13897
50 % 2 2 12335
40 % 2 2 11185
30 % 2 2 9722

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.