Sequence Similarity Clusters for the Entities in PDB 1K7L

Entity #1 | Chains: A,C,E,G
Peroxisome proliferator activated receptor alpha protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 18 1656
95 % 15 18 1959 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.6
PDBFlex
90 % 15 18 2002
70 % 49 58 447
50 % 192 227 107
40 % 192 227 130
30 % 1064 1254 8
Entity #2 | Chains: B,D,F,H
steroid receptor coactivator protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 16829
95 % 2 2 15621
90 % 2 2 15296
70 % 2 2 14313
50 % 2 2 12642
40 % 2 2 11350
30 % 2 2 9642

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures